Change log

2.1.0 (11/05/2020)

  • configured flake8 in setup.cfg and added flake8 test in travis.yml
  • added compute_zonal_statistics method to ZonalAnalysis and aded ZonalGridAnalysis class
  • Implemented the effective_mesh_size metric

2.0.0a1 (24/09/2019)

  • gradient -> zonal
  • corrected cmap arg: default from rcParams, accept str
  • updates in the docs (changed link to notebook + cleaned Makefile)

2.0.0a0 (20/09/2019)

  • corrected shapely version in setup.py (bumpversion messed it)
  • updated bumpversion for release candidates
  • catch TypeError for existing metrics but at the wrong level
  • always import modules, not methods/classes
  • consistent API: all data frames obtained with compute methods

1.1.1 (18/09/2019)

  • corrected rst typo in total_area docs
  • fixed missing perimeter distribution statistic metric and dried class constants definitions
  • fixed patch edge array computation when computing ENN (otherwise the speed-up of 1.1.0 is not effective)

1.1.0 (17/09/2019)

  • speed-up (~x2) in Landscape.compute_patch_euclidean_nearest_neighbor: compute pixel-to-pixel distances for patch edges only

1.0.2 (25/07/2019)

  • fix landscape array dtype in SpatioTemporalBufferAnalysis
  • included LICENSE in MANIFEST.in

1.0.1 (24/07/2019)

  • deleted Python 2 classifiers in setup.py
  • fix ValueError message for landscape_crs and landscape_transform in BufferAnalysis
  • fix landscape array dtype in GradientAnalysis and BufferAnalysis

1.0.0 (18/07/2019)

  • dropped Python 2 support
  • added SpatioTemporalBufferAnalysis.plot_landscapes method
  • added buffer_dist_legend argument and docs in SpatioTemporalBufferAnalysis. plot_metric
  • fix proper metric data frame properties in SpatioTemporalBufferAnalysis
  • pass transform argument when initializating MultiLandscape instances (i.e., SpatioTemporalAnalysis, BufferAnalysis, GradientAnalysis and SpatioTemporalBufferAnalysis)
  • plot_landscape and plot_landscapes with rasterio.plot.show
  • changed feature_{name,values} for attribute_{name,values} in MultiLandscape (abstract) class
  • dropped plot_metrics method

0.6.1 (02/07/2019)

  • cell width and length comparisons with numpy.isclose to deal with imprecisions that come from float pixel resolutions (e.g., in GeoTIFF files)
  • critical fix: moved pythran signatures from compute.pythran to compute.py so that the build is properly done when pip-installing

0.6.0 (01/07/2019)

  • flat array approach to the computation of the adjacency matrix with pythran to improve performance (plus fixes a bug on the computation of total_edge)
  • initialization of scipy.spatial.cKDTree with keyword arguments balanced_tree and compact_nodes set to False

0.5.0 (28/05/2019)

  • methods plotting multiple axes return only the figure instead of a tuple with the figure and the axes
  • settings module that allow configuring metrics’ labels in plots, defaulting to FRAGSTATS abbreviations
  • chaged CRS in tests to work with pyproj >= 2.0.0
  • corrected figlength for figwidth
  • warn when computing metrics that require an unmet minimum number of patches or classes (and their computation returns nan)
  • all tests with unittest.TestCase assert methods

0.4.1 (03/04/2019)

  • added docstrings for MultiLandscape, GradientAnalysis and BufferAnalysis
  • raise ValueError when using buffer rings around a polygon geometry

0.4.0 (03/04/2019)

  • implemented SpatioTemporalBufferAnalysis with a dedicated plot_metric method
  • added buffer ring-wise analysis through a buffer_rings boolean argument in BufferAnalysis

0.3.1 (29/03/2019)

  • float equality comparations with numpy isclose method

0.3.0 (28/03/2019)

  • implemented GradientAnalysis and BufferAnalysis
  • added optional geopandas dependences
  • created abstract MultiLandscape class
  • Landscape initialization from ndarray or geotiff (dropped read_geotiff method)
  • implemented contagion
  • convolution-based adjacency dataframe
  • fixed bug with class_cond in Landscape.compute_arr_edge

0.2.0 (18/03/2019)

  • implemented euclidean_nearest_neighbor and all its corresponding class/landscape distribution statistic metrics
  • fixed dtype of self.classes in landscape.Landscape
  • set default argument nodata=None (instead of nodata=0) for landscape.read_geotiff
  • changed test input data files
  • implemented __len__ of spatiotemporal.SpatioTemporalAnalysis

0.1.1 (22/01/2019)

  • corrected if-else statements involving None variables

0.1.0 (22/01/2019)

  • initial release